Teaching



Chemistry & Biochemistry 156 – Fall 2014

Biophysical Chemistry

 

Syllabus

Day 1 slides
Homework #1 Answers
Day 2 slides
Day 3 slides
Day 4 slides
Day 4 – extra notes on activity coefficients of ions
Homework #2 Answers
Day 5 slides
Day 6 slides
Homework #3 Answers
Day 7 slides
Example Midterm #1 Key
Notes for Day 8 (no class)
Day 9 slides (special topic on topologically complex proteins (not required reading))
Midterm #1 (key)
Stat mech treatment of the helix-coil transition (simplified Zimm model) pdf Excel
Homework #4 Answers
Day 11 slides
Day 12 slides
Homework #5 Answers
Day 13 slides
Day 14 slides
section on symmetry (Ch. 16) from Eisenberg & Crothers
early paper by Crick and Watson on prediction of virus symmetry
Day 15 slides
Day 16 slides
Example midterm #2 Answers
Homework #6 Answers
Day 17 slides
slides on simulating diffusion into a photobleached hole
Day 18 slides
Homework #7 (part a) Answers
Day 19 slides
Day 20 slides
Midterm #2 (key)
Day 22 slides
Homework #8 Answers
Day 23 slides
Slides on microfluidics and single molecule kinetics
Day 24 slides
Slides on kinetics of multistep process approaching equil (example for protein folding)
Day 25 slides
Instruction for Python programming assignment on kinetics
Day 26 slides
Some old problems on material after the 2nd midterm Answers
Day 27 slides
Day 28 slides
Example Final (2013) Answers
Timing and locations for visit to X-ray crystallography lab


Office Hours

TOY
Mon 3:30 – 4:30
Thurs 1:00 – 2:00
(Boyer 244 — If I’m not there, find me in my office in Boyer 255A)

Dan
Thurs 9:00 – 10:00 (MolSci 3515)
Fri 4:00 – 5:00 (MolSci 3515)

Yuxi
Tues 3:00 – 4:00 (MolSci 3515)
Wed 3:00 – 4:00 (MolSci 35150

structural, computational, and synthetic biology